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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CHI3_CANAL
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYLLTIFSL LLPALAINAR SNSNVAVYWG QNSGGSQQRL SYYCDSDAVD IVILSFMHQF  60
   61 PSPIQLNFAN ACEGTYTANG ILQCQTIAED IKYCQNKGKT ILLSLGGAAG SYGFSDDATA 120
  121 KQFAHTLWDL FGNSKNLATN DRPFYDAVLD GFDFDIENNW STGYPALATE LRTLFQKDTS 180
  181 KNYYLGAAPQ CPYPDASVGP LLKQSEIDFV FIQFYNNYCN LGSSSFNWDT WLNYAETDSP 240
  241 NKNIKLFVGV PASSRAAGSG YNDPSAVSQY LTSDILNSKY FGGISMWDVS AGWSNTNSNG 300
  301 NFVENMKAIV KKASPGEETT SSSTTTTTTT TSTTISSSSS SSKTSKTSTT STTSSSISST 360
  361 TSSTTSSTSS SSTSSSTSST TSSSTTSSQI STTSTAPTSS TSLSSSTIST SASTSDTTSV 420
  421 TSSETTPVVT PSSLSSAITI PGDSTTTGIS KSSSTKPATS TTSALSSSTT TVATIPDDKE 480
  481 IINTPTDTET TSKPPAIITE SDATTITQNL TPSTTTKNVK TTSTNIVTEW VWAPTTLRTL 540
  541 TTTYQILTTR THIETVFAEP STVVIYN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle