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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Hsp60C-PC, Hsp60...
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRMFRYTNT LQRTAKISHV LWARNYAKDV RFGPEVRAMM LQGVDVLADA VAVTMGPKGR  60
   61 NVIIEQSWGS PKITKDGVTV AKSIALKDKF QNIGAKLVQD VANNTNEEAG DGTTTATVLA 120
  121 RAIAKEGFEK ISRGASPVEI RRGVMLAIET VKDNLRRLSR PVNTPEEICQ VATISANGDK 180
  181 SVGNLISEAI KKVGRDGVIT VKDGKTLCDE LEVIEGMKFD RGYISPYFIN TSKGAKVEFQ 240
  241 DALLLFCEKK IKSAPSIVPA LELANAQRKP LVIIAEDLEA EALSTLVVNR LKVGLQVCAV 300
  301 KAPGFGDNRK ENLMDMAVAT GGIVFGDEAN MVRLEDIKMS DFGRVGEVVV SKDDTMLLKG 360
  361 KGQKAEVEKR VEGLREAIKE STSSYEKEKM QERLARLSSG VALLRVGGSS DVEVSEKKDR 420
  421 VIDALNATRA AVEEGIVPGG GTALLRCIQK LNDLKGANED QNMGIEIIRR ALRMPCLTIA 480
  481 KNAGVDGAMV VAKVEILDGD YGYDALKGEY GNMIERGIID PTKVVRTAIS DAAGVASLLT 540
  541 TAEAVVTELP LEEAAAAGAA AGLGALGGMG MGGMGM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle