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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: jgi|Picpa1|36189...
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILHTYIILS LLTIFPKAIG LSLQMPMALE ASYASLVEKA TLAVGQEIDA IQKGIQQGWL  60
   61 EVETRFPTIV SQLSYSTGPK FAIKKKDATF WDFYVESQEL PNYRLRVKRN NPEVLKVDFT 120
  121 KQYSGYLDVE ADDKHFFYWF FESRNDPQND PIILWLNGGP GCSSLTGLFF ELGSSRINEN 180
  181 LKPIFNPYSW NGNASIIYLD QPVNVGFSYS SSSVSNTVVA GEDVYAFLQL FFQHFPEYQT 240
  241 NDFHIAGESY AGHYIPVFAD EILSQKNRNF NLTSVLIGNG LTDPLTQYRY YEPMACGEGG 300
  301 APSVLPADEC ENMLVTQDKC LSLIQACYDS QSAFTCAPAA IYCNNAQMGP YQRTGKNVYD 360
  361 IRKECDGGSL CYKDLEFIDT YLNQKFVQDA LGAEVDTYES CNFEINRNFL FAGDWMKPYH 420
  421 EHVSSLLNKG LPVLIYAGDK DFICNWLGNR AWTDVLPWVD ADGFEKAEVQ DWLVNGRKAG 480
  481 EFKNYSNFTY LRVYDAGHMA PYDQPENSHE MVNRWISGDF SFH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle