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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CBP3_ORYSA
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATARVSLIL LVVVLAASAC AEGLRLPRDA KFPAAQAERL IRSLNLLPKE AGPTGAGDVP  60
   61 SVAPGELLER RVTLPGLPQG VGDLGHHAGY YRLPNTHDAR MFYFLFESRG KKEDPVVIWL 120
  121 TGGPGCSSEL AVFYENGPFT ISNNMSLAWN KFGWDTISNI IFVDQPTGTG FSYSSDDRDT 180
  181 RHDETGVSND LYSFLQVFFK KHPEFAKNDF FITGESYAGH YIPAFASRVH QGNKANEGIH 240
  241 INLKGFAIGN GLTDPAIQYK AYTDYALDMN LIKKSDYDRI NKFIPPCEFA IKLCGTNGKA 300
  301 SCMAAYMVCN SIFSSIMKLV GTKNYYDVRK ECEGKLCYDF SNLEKFFGDK AVKEAIGVGD 360
  361 LEFVSCSTTV YQAMLTDWMR NLEVGIPALL EDGINVLIYA GEYDLICNWL GNSRWVHSME 420
  421 WSGQKDFVSS HESPFVVDGA EAGVLKSHGP LSFLKVHNAG HMVPMDQPKA SLEMLRRFTQ 480
  481 GKLKEEWLAE LPEQPMYAAM 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle