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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CBP3_HORVU
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTTPRLVSL LLLLALCAAA AGALRLPPDA SFPGAQAERL IRALNLLPKD SSSSSGRHGA  60
   61 RVGEGNEDVA PGQLLERRVT LPGLPEGVAD LGHHAGYYRL PNTHDARMFY FFFESRGKKE 120
  121 DPVVIWLTGG PGCSSELAVF YENGPFTIAN NMSLVWNKFG WDKISNIIFV DQPTGTGFSY 180
  181 SSDDRDTRHD ETGVSNDLYD FLQVFFKKHP EFIKNDFFIT GESYAGHYIP AFASRVHQGN 240
  241 KKNEGTHINL KGFAIGNGLT DPAIQYKAYT DYALEMNLIQ KADYERINKF IPPCEFAIKL 300
  301 CGTNGKASCM AAYMVCNTIF NSIMKLVGTK NYYDVRKECE GKLCYDFSNL EKFFGDKAVR 360
  361 QAIGVGDIEF VSCSTSVYQA MLTDWMRNLE VGIPALLEDG INVLIYAGEY DLICNWLGNS 420
  421 RWVHSMEWSG QKDFAKTAES SFLVDDAQAG VLKSHGALSF LKVHNAGHMV PMDQPKAALE 480
  481 MLRRFTQGKL KEAVPEEESS TTSFYAAM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle