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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CBP1_CANAL
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRTKSTKVL IIGAGVSGLK AAETILSKSF LTGDDVLVVE AQNRIGGRLK TTDTSQSKLG  60
   61 INYDLGASWF HDSLNNIVLN HMINDGLLDD EKDVYFDDKD LKTFSSTGEV PIVDKKLNRV 120
  121 LEDIEKYIQL YFNRNLGVPD LSLRDIVAQY FEKYNRLITE EQREYCGRMM RYLEFWFGIS 180
  181 WDRISGKYAV TTHQGRNLLN KKGYGYLVES LAKRIPESSL LLEEPVNKII RNNKDAGKRV 240
  241 LVETINGLQI FCDYLIVTVP QSILSLEESS PYSIKWEPKL PQRLVESINS IHFGALGKVI 300
  301 FEFDRIFWDN SKDRFQIIAD HTDGDLSREL TELPKPFTYP LFAVNFGRVH NGKASLVILT 360
  361 QAPLTNYLET HPDQAWQYYQ PMLQKLSIND EPIPDPINTI VTDWTTNPYI RGSYSTMYTN 420
  421 DDPSDLIISL SGDFEDLGIS EPYIKFAGEH TTSEGTGCVH GAYMSGIYAA DCILENIFRN 480
  481 DVTGYTIIG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle