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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|229507548, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDIQSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM  60
   61 ADATYIEPIH WEVVRKIIEK ERPDAILPTM GGQTALNCAL ALEKHGVLAE FGVEMIGATA 120
  121 DAIDKAEDRS RFDKAMKSIG LECPRADTAK SMEEAYKVLD MVGFPCIIRP SFTMGGSGGG 180
  181 IAYNREEFEE ICTRGLDLSP TNELLIDESL IGWKEYEMEV VRDKNDNCII VCAIENFDPM 240
  241 GIHTGDSITV APAQTLTDKE YQIMRNASLA VLREIGVETG GSNVQFGINP KDGRMVIIEM 300
  301 NPRVSRSSAL ASKATGFPIA KVAAKLAVGF TLDELMNDIT GGATPASFEP TIDYVVTKIP 360
  361 RFNFEKFAGA NDRLTTQMKS VGEVMAIGRN QQESLQKALR GLEVGAAGLD EKVDLDAPDA 420
  421 LTKIRYELKE AGAERIWYIA DAFRAGMSVD GVFNLTNIDR WFLVQIEELV KLEAEVKAGG 480
  481 FAGLNQDVLR KMKRKGFSDA RLSKLLGVSE NEIRRLRDQY NIHPVYKRVD TCAAEFKSDT 540
  541 AYMYSTYDEE CEANPTDKDK IMVLGGGPNR IGQGIEFDYC CVHAALALRE DGYETIMVNC 600
  601 NPETVSTDYD TSDRLYFEPV TLEDVLAIVR VEKPKGVIVQ YGGQTPLKLA RALEAAGVPV 660
  661 IGTSPDAIDR AEDRERFQQA VQRLGLKQPD NATVTAIEQA IEKSREIGFP LVVRPSYVLG 720
  721 GRAMEIVYDE QDLRRYFNEA VSVSNESPVL LDRFLDDATE VDVDAICDGE RVVIGGIMEH 780
  781 IEQAGVHSGD SACSLPAYTL SQEIQDKMRE QVEKLAFELG VRGLMNIQFA VKDNEVYLIE 840
  841 VNPRAARTVP FVSKATGAPL AKIAARVMVG QTLEQQGFTK EIIPPYYSVK EVVLPFNKFP 900
  901 GVDPLLGPEM RSTGEVMGVG ATFAEAYAKA ELGCGSVYPE GGRALLSVRE GDKQRVVDLA 960
  961 SKLVKLGYQL DATHGTAVIL GEAGINPRLV NKVHEGRPHI LDRIKNHEYT YIVNTASGRQ1020
 1021 AIEDSKVLRR GALAHKVNYT TTLNAAFATC MSHTADAKAS VTSVQELHAR VKANQA

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