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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CARB_RHILO
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRRTDIKSI LIIGAGPIVI GQACEFDYSG TQACKALKEE GFRVILVNSN PATIMTDPEL  60
   61 ADATYIEPIT PEVVAKIIAK ERPDALLPTM GGQTALNTAL SLRRMGVLDR YNVEMIGADA 120
  121 TAIDKAEDRA LFREAMSKIG LETPKSMLAN ATDVKNADRK THEAERAALK AEKPDNLDAE 180
  181 LDALETRWNL GEGDRKQRYI SHAMAIAAQA LDHVGLPAII RPSFTMGGTG GGIAYNRAEF 240
  241 YDIVQSGLDA SPTTEVLIEE SVLGWKEYEM EVVRDKADNC IIVCSIENID PMGVHTGDSI 300
  301 TVAPALTLTD KEYQMMRNAS IAVLREIGVE TGGSNVQFAV NPADGRLVVI EMNPRVSRSS 360
  361 ALASKATGFP IAKIAAKLAV GYTLDELEND ITGGATPASF EPSIDYVVTK IPRFAFEKFP 420
  421 GAEPVLTTAM KSVGEVMAIG RTFQESLQKA LRGLETGLTG LDEIEIPGLG HGATVANHAD 480
  481 DRNAIRAALG TPTPDRLRMV AQAIRMGTSL EDVHAMCKID PWFLEQIAGI LAMEARIREH 540
  541 GIPQDAVNLR MLKAMGFSDA RLASLTRTDA EVVTKIREKL DVHPVYKRID TCAAEFASPT 600
  601 AYMYSTYEVP FAGALANEAQ VSSRKKVVIL GGGPNRIGQG IEFDYCCCHA AFALRDAGYE 660
  661 AIMINCNPET VSTDYDTSDR LYFDPLTAED VLEILRAEQA SGELLGVIVQ FGGQTPLKLA 720
  721 DALEKAGIPI LGTSPDMIDL AEDRDRFQKL LHKLGLSQPK NGIAYSVEQA RLVAGELGFP 780
  781 LVVRPSYVLG GRAMQIIHDE SMLQSYLLDT VPGLVPEDIK QKYPNDKTGQ INTLLGKNPL 840
  841 LFDTYLSGAI EVDVDCLCDG KATFVSGILE HIEEAGIHSG DSACSLPVHS LPSELVDELE 900
  901 RQTAALARAL NVGGLMNVQY AIKDGTVYVL EVNPRASRTV PFVAKTIGRP IAKIAARIMA 960
  961 GETLEDAFAH YGAMPDPRNP GHIAVKEAVF PFARFPGVDI LLGPEMRSTG EVMGLDRDFA1020
 1021 LAFAKSQLGA GVDLPRSGTL FVSVRDEDKK GILPAVKRLA GLGFKVLATS GTQRFLAENG1080
 1081 VVAEKINKVL EGRPHIEDAI RNRQVQIVFN TTDGQKAVSD SKSLRRATLM QKVPYYTTLS1140
 1141 GAAAVAEAIA ALKAGSLEVR PLQEYFA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle