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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CARB_PSESM
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPAM  60
   61 ADATYIEPIK WQTVAKIIEK ERPDALLPTM GGQTALNCAL DLEREGVLEK FGVEMIGANA 120
  121 DTIDKAEDRS RFDKAMKSIG LACPRSGIAH SMEEANAVLE KLGFPCIIRP SFTMGGTGGG 180
  181 IAYNREEFEE ICARGLDLSP TKELLIDESL IGWKEYEMEV VRDKKDNCII VCSIENFDPM 240
  241 GVHTGDSITV APAQTLTDKE YQILRNASLA VLREIGVETG GSNVQFGICP DTGRMVVIEM 300
  301 NPRVSRSSAL ASKATGFPIA RVAAKLAVGY TLDELSNEIT GGKTPASFEP SIDYVVTKLP 360
  361 RFAFEKFAKA DARLTTQMKS VGEVMAIGRT FQESLQKALR GLEVGVCGLD PKLDLSHPES 420
  421 MSTLKRELTV PGAERIWYVA DAFRAGMTVE EIFAMNMIDP WFLVQIEDLV KDEEKIKTLG 480
  481 LSAIDRDLMY RLKRKGFSDA RLAKLVGVTE KNLRTHRHKL DVFPVYKRVD TCAAEFATDT 540
  541 AYLYSTYEEE CEANPSTRDK IMILGGGPNR IGQGIEFDYC CVHAALALRE DGYETIMVNC 600
  601 NPETVSTDYD TSDRLYFEPV TLEDVLEIVR VEKPKGVIVQ YGGQTPLKLA RALEAAGVPI 660
  661 IGTSPDAIDR AEDRERFQQM VERLNLRQPP NATVRSEDEA IRAAAKIGYP LVVRPSYVLG 720
  721 GRAMEIVYQE DELKRYLREA VQVSNDSPVL LDHFLNCAIE MDVDAVCDGT DVVIGAIMQH 780
  781 IEQAGVHSGD SACSLPPYSL PAHIQDEMRE QVKKMALELG VVGLMNVQLA LQGEDIYVIE 840
  841 VNPRASRTVP FVSKCIGVSL AMIAARVMAG KTLKELNFTK EIIPNFYSVK EAVFPFAKFP 900
  901 GVDPILGPEM KSTGEVMGVG DTFGEAFAKA QMGASEVLPT GGTAFISVRD DDKPLVEAVA 960
  961 RDLINLGFEI VATAGTAKLI EAAGLKVRRV NKVTEGRPHV VDMIKNDEVT LIINTTEGRQ1020
 1021 SIADSYSIRR NALQHKIYCT TTIAAGEAIC EALKFGPEKT VRRLQDLHAG LKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle