YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BIOC_ECOLI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATVNKQAIA AAFGRAAAHY EQHADLQRQS ADALLAMLPQ RKYTHVLDAG CGPGWMSRHW  60
   61 RERHAQVTAL DLSPPMLVQA RQKDAADHYL AGDIESLPLA TATFDLAWSN LAVQWCGNLS 120
  121 TALRELYRVV RPKGVVAFTT LVQGSLPELH QAWQAVDERP HANRFLPPDE IEQSLNGVHY 180
  181 QHHIQPITLW FDDALSAMRS LKGIGATHLH EGRDPRILTR SQLQRLQLAW PQQQGRYPLT 240
  241 YHLFLGVIAR E

Type	Start	End	Confidence
Signal Peptide	1	18	0.62
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	251	0.99