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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BEM2_ASHGO
Protein type: Globular with Signal Peptide
Type Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLKWAARNK KPPSAPQSCA SKPSSASQSS CVDERISATP RSSISSNSSP NSKNNMSRHS  60
   61 HSNGSVYSDE TTLKTAQTHY TQQGQQAKPQ QHTQQQQQQP QTPMQLQVPT GQAHKRTLTC 120
  121 EDMKAGARCE EQVSPCSQPA GSPVRRGGGL NGETYDGTVF RLGWVNKAQG AAPAREGRYS 180
  181 HQPTASLSSI GSERPHFTGG GTSGYQYVAT AYRLHRAQLK GCILNLYKSG LTNVKYFDPA 240
  241 LEPSAAALQM HQERQEMPLL QPPLPSEAVP APSILEASME SGELRLEYLS EAYPHPDLQL 300
  301 DKKDGKILSG SLESLCHAVL FMPTTDAKRV TDILLLLPLL DDFTRVLNYF NLFGKVFSKH 360
  361 HPAGAAGADD LNQNYNISNE TDRQLTLRLA TVVQTVLDMF PGFLLDDKIF QSLVILLDTI 420
  421 SFHDEDTSQE LKVAIAEKQT VLVKLTGFAN EPIQSAKLDV LIKVQSFLKL DTEKVANQIH 480
  481 KINLTFNRVW SPQADYSLLY DSQYTQKHVE LNPLVFFNDK NVQYLSRLMV SHIFCEETGF 540
  541 TPKKRAEVLT KWVQLGCKFE RLGDMVSWLA IATVICSIPV LRLTRTWQYV PDSYLKIIFK 600
  601 DWVPTIVQLD RRQMSSKSMN SVFILAPPNL NDAFVRDNVI PYFGDLVIHS DDLPRDSKYK 660
  661 YLEKKIRRTK NAFYKWQQRL DQAFAQDRDS ASSFTDSLHL DEEEHDVADF YQYWRFHMNL 720
  721 PPMNIETIME MSLKMEPPSI NQQTYSKTYS TRSALISGAY LPTLFTTLLP SYSLFPQELL 780
  781 IAAASTPSTK NNNSSQASNR ISQLSVNSTP HSNASSSSAA SAVTGIDNID VPITKEISSK 840
  841 LSNKQVLLKF IRDMFNVDIN VFHISDDVIF KSIRDYEAKS RPTSVVIESP KRLSLLSSVS 900
  901 PDVSAVSSAL ENLDLFKNFN SSSDDIAEFT VQVVLKCASL EKIFDILVLT SRVFSNLVTT 960
  961 TDLVSYFNSE KARREKSGAQ HNGQHSIGLL DFALISLIMD NELFAETFFN NYKSFTTTLC1020
 1021 VLENLAKRFI GAKSSAISIS LINKLRNSES SRQIPPSTTS NQFSASGIFK PSYDELKFPV1080
 1081 WDLKVTSVEG CPLDYLAKIQ IGVLESLYHL IREHYADFTD DLANNKTFLD ILKIINQEVY1140
 1141 DEWDKRLDDL RNNNNSSQKR KNSCDDNSSA KITFHVNDAR PENSNENKRG AATNLGDSSL1200
 1201 AALEKLQCTL QDLYVKIKSS YQRQLYRPLG VTRNCRKVHD MLCQFQPQTS MSALIMNGSS1260
 1261 DTLDKMVTEF QALKHTDYDD IINWIYKLDH FITSKLKLVS NQDWIQVSQI LESLSNDSLV1320
 1321 ALFNYPLHAE SNNVIASGSS QLDDLQILDI FTWLSTLESG SAHIIDKFPA SVQLIVRLHL1380
 1381 SLTKFFTVHI AHLHSTYEAR VNTCSLILEI LNFVHVKNAN VNLFHSDDAG EGSMATISPH1440
 1441 VPSFIETAIE NAIISPESRF FEVSWKQAYK TISEKDEKLT FIGSVLTGLD KSTAHFLDAD1500
 1501 NRQPVRPKNF SPCPGWFISR LLEITGLVPN MSIENSKMIN FDKRRFINNI VINYQDLIPN1560
 1561 TEQLPSHDDE KSAHQFGSIL FHYGTESSIK AFRKASKEAA SNEARKLKFQ AMGLFNDILV1620
 1621 TEVYKVQRDQ KKQEQLTVQE HEAKRSVLIQ HPNKVSVSSA SSSVSGSSSG STARTSNPAH1680
 1681 AAYALNMAGS LSISAARHGR SSVSSRSSVI SNTATATSPA SGASPNQTST SHHGGMGKKI1740
 1741 GGFLRRPFSI SGFTSSSSQY TTTSVVLSGV QANGSISPYE LPELTSEIQD TKIVTVIKTF1800
 1801 EIKSCIQINN YRQDPDMMHC FKIVMEDGTQ HTLQCMDDAD MHEWMKAITL SKRYSFHSKR1860
 1861 FKGKTSNKIF GVPVEDVCER EGALIPNIIV KLLDEIELRG LDEVGLYRVP GSVGSINALK1920
 1921 NAFDDEGAVH NTFTLEDDRW FEINTIAGCF KLYLRELPES LFTNEKVDEF VNIMTAYKNH1980
 1981 EVDLSQFQNG IKTLLSTLPV FNYHILKRLF LHLNRVHQHV ENNRMDASNL AIVFSMSFIN2040
 2041 QDDLASTMGP TLGLLQMLLQ HLIRNPEHYF T

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