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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CNTN2_MOUSE
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAPARKRAS LLLLLLATMA LVSSPGWSFS QGTPATFGPV FEEQPVGLLF PEESAEDQVT  60
   61 LACRARASPP ATYRWKMNGT EMNLEPGSRH QLMGGNLVIM SPTKAQDAGV YQCLASNPVG 120
  121 TVVSKEAVLR FGFLQEFSKE ERDPVKTHEG WGVMLPCNPP AHYPGLSYRW LLNEFPNFIP 180
  181 TDGRHFVSQT TGNLYIARTN ASDLGNYSCL ATSHLDFSTK SVFSKFAQLN LAAEDPRLFA 240
  241 PSIKARFPPE TYALVGQQVT LECFAFGNPV PRIKWRKVDG SLSPQWGTAE PTLQIPSVSF 300
  301 EDEGTYECEA ENSKGRDTVQ GRIIVQAQPE WLKVISDTEA DIGSNLRWGC AAAGKPRPMV 360
  361 RWLRNGEPLA SQNRVEVLAG DLRFSKLNLE DSGMYQCVAE NKHGTIYASA ELAVQALAPD 420
  421 FRQNPVRRLI PAARGGEISI PCQPRAAPKA TILWSKGTEI LGNSTRVTVT LDGTLIIRNI 480
  481 SRSDEGKYTC FAENFMGKAN STGILSVRDA TKITLAPSSA DINVGDNLTL QCHASHDPTM 540
  541 DLTFTWTLDD FPVDFDKPGG HYRRASVKET IGDLTILNAQ LRHGGTYTCM AQTVVDGASK 600
  601 EATVLVRGPP GPPGGVVVRD IGDTTVQLSW SRGFDNHSPI AKYTLQARTP PSGKWKQVRT 660
  661 NPVNIEGNAE TAQVLGLMPW MDYEFRVSAS NILGTGEPSG PSSRIRTKEA VPSVAPSGLS 720
  721 GGGGAPGELT INWTPMSREY QNGDGFGYLL SFRRQGSSSW QTARVPGADT QYFVYSNDSI 780
  781 HPYTPFEVKI RSYNRRGDGP ESLTAIVYSA EEEPKVAPAK VWAKGSSSSE MNVSWEPVLQ 840
  841 DMNGILLGYE IRYWKAGDKE AAADRVRTAG LDSSARVTGL YPNTKYHVTV RAYNRAGTGP 900
  901 ASPSADAMTM KPPPRRPPGN ISWTFSSSSL SLKWDPVVPL RNESTVTGYK MLYQNDLQPT 960
  961 PMLHLTSKNW IEIPVPEDIG HALVQIRTTG PGGDGIPAEV HIVRNGGTSM MVESSAVRPA1020
 1021 HPGPVFSCMV ILMLAGCQRL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle