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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATPBM_NICPL
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRRLLASL LRQSAQRGGG LISRSLGNSI PKSASRASSR ASPKGFLLNR AVQYATSAAA  60
   61 PASQPSTPPK SGSEPSGKIT DEFTGAGSIG KVCQVIGAVV DVRFDEGLPP ILTALEVLDN 120
  121 QIRLVLEVAQ HLGENMVRTI AMDGTEGLVR GQRVLNTGSP ITVPVGRATL GRIINVIGEA 180
  181 IDERGPITTD HFLPIHREAP AFVEQATEQQ ILVTGIKVVD LLAPYQRGGK IGLFGGAGVG 240
  241 KTVLIMELIN NVAKAHGGFS VFAGVGERTR EGNDLYREMI ESGVIKLGEK QSESKCALVY 300
  301 GQMNEPPGAR ARVGLTGLTV AEHFRDAEGQ DVLLFIDNIF RFTQANSEVS ALLGRIPSAV 360
  361 GYQPTLATDL GGLQERITTT KKGSITSVQA IYVPADDLTD PAPATTFAHL DATTVLSRQI 420
  421 SELGIYPAVD PLDSTSRMLS PHILGEDHYN TARGVQKVLQ NYKNLQDIIA ILGMDELSED 480
  481 DKMTVARARK IQRFLSQPFH VAEVFTGAPG KYVDLKESIN SFQGVLDGKY DDLSEQSFYM 540
  541 VGGIDEVIAK AEKIAKESAA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle