YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ASSY_BACHD
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKKVVLAY SGGLDTSVAI KWLSDKGYDV IAVGLDVGEG KDLEFVKEKA LKVGAIESYT  60
   61 IDAKKEFAEE FVLPALQAHA LYEQKYPLVS ALSRPLISKK LVEIAEQTGA QAVAHGCTGK 120
  121 GNDQVRFEVS IQALNPNLEV LAPVREWAWS RDEEIEYAKK NNIPIPIDLD NPYSVDQNLW 180
  181 GRSNECGILE DPWATPPEGA YELTVAIEDA PDQPEIVEIG FEKGIPVTLN GKSYPVHELI 240
  241 LELNQIAGKH GVGRIDHVEN RLVGIKSREV YECPGAMTLI KAHKELEDLT LTKEVAHFKP 300
  301 VVEKKIAELI YEGLWFSPLQ PALSAFLKET QSTVTGVVRV KLFKGHAIVE GRKSEYSLYN 360
  361 EKLATYTPDD EFDHNAAVGF ISLWGLPTKV YSMVNKEMKE KQEKKEVTS

Type	Start	End	Confidence
Signal Peptide	1	19	0.62
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	409	0.99