YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ARTM_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEYLPELMK GLHTSLTLTV ASLIVALILA LIFTIILTLK TPVLVWLVRG YITLFTGTPL  60
   61 LVQIFLIYYG PGQFPTLQEY PALWHLLSEP WLCALIALSL NSAAYTTQLF YGAIRAIPEG 120
  121 QWQSCSALGM SKKDTLAILL PYAFKRSLSS YSNEVVLVFK STSLAYTITL MEVMGYSQLL 180
  181 YGRTYDVMVF GAAGIIYLVV NGLLTLMMRL IERKALAFER RN

Type	Start	End	Confidence
Non-Cytoplasmic	1	15	0.85
Transmembrane Helix	16	37	0.93
Cytoplasmic	38	46	0.73
Transmembrane Helix	47	69	0.89
Non-Cytoplasmic	70	89	0.78
Transmembrane Helix	90	112	0.81
Cytoplasmic	113	155	0.88
Transmembrane Helix	156	176	0.80
Non-Cytoplasmic	177	186	0.80
Transmembrane Helix	187	211	0.85
Cytoplasmic	212	222	0.98