YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ARGO_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSYYFQGLA LGAAMILPLG PQNAFVMNQG IRRQYHIMIA LLCAISDLVL ICAGIFGGSA  60
   61 LLMQSPWLLA LVTWGGVAFL LWYGFGAFKT AMSSNIELAS AEVMKQGRWK IIATMLAVTW 120
  121 LNPHVYLDTF VVLGSLGGQL DVEPKRWFAL GTISASFLWF FGLALLAAWL APRLRTAKAQ 180
  181 RIINLVVGCV MWFIALQLAR DGIAHAQALF S

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.87
Transmembrane Helix	6	26	0.86
Cytoplasmic	27	36	0.84
Transmembrane Helix	37	58	0.94
Non-Cytoplasmic	59	66	0.73
Transmembrane Helix	67	86	0.94
Cytoplasmic	87	106	0.89
Transmembrane Helix	107	127	0.89
Non-Cytoplasmic	128	147	0.89
Transmembrane Helix	148	170	0.94
Cytoplasmic	171	181	0.84
Transmembrane Helix	182	200	0.92
Non-Cytoplasmic	201	211	0.85