YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ARCL_ECOLI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKIVLALG GNALGDDLAG QMKAVKITSQ AIVDLIAQGH EVIVTHGNGP QVGMINQAFE  60
   61 AAAKTEAHSP MLPMSVCVAL SQGYIGYDLQ NALREELLSR GINKPVATLV TQVEVDANDP 120
  121 AFLNPTKPIG SFFTEQEAEQ LTKQGYTLKE DAGRGYRRVV ASPKPVDIIE KETVKALVDA 180
  181 GQVVITVGGG GIPVIREGNH LRGASAVIDK DWASARLAEM IDADMLIILT AVEKVAINFG 240
  241 KENEQWLDRL SLSDAERFIE EGHFAKGSML PKVEAAASFA RSRAGREALI TVLSKAKEGI 300
  301 EGKTGTVICQ

Type	Start	End	Confidence
Signal Peptide	1	15	0.86
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	310	0.99