YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YET1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLYFTTLFL LLTVEMVMLF IFVLPLPFRI RRGIFSTYNQ LTAKQQIKTI IFITGCLVGL  60
   61 LFIDSWKRSQ IRVSLYHNDN SGSIGSSAVT PIQALASRAY NQRNMYISGF ILYFSICIPT 120
  121 VMSIVKRLVK YQGLINEQEK QKLNKPSSNS KKDSNEADST KLQEELRKKQ ISLEGLQKQV 180
  181 KNLEKYFDEK NQPGNVAAAE ASKKGN

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.70
Transmembrane Helix	7	28	0.93
Cytoplasmic	29	46	0.74
Transmembrane Helix	47	66	0.89
Non-Cytoplasmic	67	104	0.73
Transmembrane Helix	105	125	0.78
Cytoplasmic	126	206	0.73