YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ADA2B_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGPTMDHQE PYSVQATAAI ASAITFLILF TIFGNALVIL AVLTSRSLRA PQNLFLVSLA  60
   61 AADILVATLI IPFSLANELL GYWYFWRAWC EVYLALDVLF CTSSIVHLCA ISLDRYWAVS 120
  121 RALEYNSKRT PRRIKCIILT VWLIAAVISL PPLIYKGDQR PEPRGLPQCE LNQEAWYILA 180
  181 SSIGSFFAPC LIMILVYLRI YVIAKRSHCR GLGAKRGSGE GESKKPQPVA GGVPTSAKVP 240
  241 TLVSPLSSVG EANGHPKPPR EKEEGETPED PEARALPPTW SALPRSGQGQ KKGTSGATAE 300
  301 EGDEEDEEEV EECEPQTLPA SPASVCNPPL QQPQTSRVLA TLRGQVLLGK NVGVASGQWW 360
  361 RRRTQLSREK RFTFVLAVVI GVFVVCWFPF FFSYSLGAIC PQHCKVPHGL FQFFFWIGYC 420
  421 NSSLNPVIYT VFNQDFRRAF RRILCRPWTQ TGW

Type	Start	End	Confidence
Non-Cytoplasmic	1	17	0.94
Transmembrane Helix	18	43	0.89
Cytoplasmic	44	53	0.89
Transmembrane Helix	54	76	0.92
Non-Cytoplasmic	77	92	0.91
Transmembrane Helix	93	113	0.93
Cytoplasmic	114	133	0.89
Transmembrane Helix	134	155	0.91
Non-Cytoplasmic	156	175	0.96
Transmembrane Helix	176	198	0.90
Cytoplasmic	199	371	0.98
Transmembrane Helix	372	392	0.97
Non-Cytoplasmic	393	412	0.88
Transmembrane Helix	413	433	0.93
Cytoplasmic	434	453	0.96