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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AT1A1_RHIMB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYGAGRDKY EPAATSEHGG KKGKGKGKDR DMEELKKEVT MEDHKMTLEE LHRKYGTDLT  60
   61 RGLTTARAAE ILARDGPNAL TPPPTTPEWV KFCRQLFGGF SMLLWIGAIL CFLAYGIRKA 120
  121 SDLEPDNDNL YLGVVLSAVV IITGCFSYYQ EAKSSRIMES FKNMVPQQAL VIRNGEKLSI 180
  181 NAENVVQGDL VEVKGGDRIP ADLRIISAHG CKVDNSSLTG ESEPQTRSPD FTNENPLETR 240
  241 NIAFFSTNCV EGTARGIVIN TGDRTVMGRI ATLASGLEGG QTPIAVEIGH FIHIITGVAV 300
  301 FLGVSFFILS LILHYTWLEA VIFLIGIIVA NVPEGLLATV TVCLTLTAKR MARKNCLVKN 360
  361 LEAVETLGST STICSDKTGT LTQNRMTVAH MWFDNQIHEA DTTENQSGAS FDKSSPTWTA 420
  421 LARIAGLCNR AVFPAGQENT PILKRDVVGD ASESALLKCI ELCCGSVKDM REKNQKVAEI 480
  481 PFNSTNKYQL SVHKNANPSE SRYLLVMKGA PERILDRCSS ILLQGKEQPL DEELKDAFQN 540
  541 AYLELGGLGE RVLGFCHLLL DDEQFPDGFS FDTEDVNFPT EGLCFVGLIS MIDPPRAAVP 600
  601 DRVGKCRSAG IKVIMVTGDH PITAKAIAKG VGIISEGNET VEDIAARLNI PVNQVNPRDA 660
  661 KACVIHGTDL KDMNADQIDD ILRHHTEIVF ARTSPQQKLI IVEGCQRQGA IVAVTGDGVN 720
  721 DSPALKKADI GIAMGIAGSD VSKQAADMIL LDDNFASIVT GVEEGRLIFD NLKKSIAYTL 780
  781 TSNIPEITPF LIFIIADIPL PLGTVTILCI DLGTDMVPAI SLAYEQAESD IMKRQPRNPK 840
  841 KDKLVNERLI SMAYGQIGMI QALGGFFAYF VILAENGFLP STLLGIRVAW EDRYVNDVED 900
  901 SYGQQWTYEQ RKIVEFTCHT AFFVSIVVVQ WADLIICKTR RNSVFQQGMK NKILIFGLFE 960
  961 ETALAAFLSY CPGMDVALRM YPLKPTWWFC AFPYSLLIFI YDEVRKLILR RSPGGWVEKE1020
 1021 TYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle