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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: 5NTD_VIBCH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQGLILKSV LSAAIIASLA GCATAPAQQW EADKTYKLTI LHTNDHHGRF WQNQYGEYGM  60
   61 AARKTLIDQL RADIEAQGGS VLLLSGGDIN TGVPESDLQD AEPDFKGMSK IGYDAMALGN 120
  121 HEFDNPLEVL FKQKEWANFP MLSANIYDKA TGKRLFEPYH IFDKQGIKIA VIGLTTEDTA 180
  181 KIGNPEYIGG IDFRDPKEEA KKVIAELKKK EKPDLIIAVT HMGHYQNGEH GVNAPGDVAL 240
  241 ARYLPAGELD MIVGGHSQEP VCMEGPNLVK KNFKPGDECK PDIQNGTYIV QAYEWGKYVG 300
  301 RADYEFRNGE LNMVSYNLIP VNLKKKVEVN GETQRVFATS EIKEDSAMLE FLRPFQEKGQ 360
  361 EQLSIKIAHS NGKLEGDRNV VRFEQTNLGR MIAMAHMQRA KADFAVMNSG GVRDSIQAGD 420
  421 ITYKDVLKVQ PFGNIVSYVD MNGQEVLDYL NVVATKPVDS GAYAQFAGIS MTVADGKVSN 480
  481 VVIGGKQLRL DATYRFTVPS FNAAGGDGYP KITDHPGYVN TGFVDAEVLK DYLEANSPID 540
  541 VNRFAPAGEI VYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle