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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: abtm-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQLRLIAGL RNASNTIRSQ AVYRSFSSLT KSPALIRNAT QILSKNKRAV VQVFTRTCFH  60
   61 PGASSQVPLQ ASGQLSGYQL VQRLLKFVWP KDKPEIKRRV LVALCLLIAA KLANVSVPFL 120
  121 LRDIVNYYNG KAPEFLKLTF DGTPSQTIFT AGIATCIAYG IARATASLFN ELRNAVFAKV 180
  181 AQNSIRSISR SIFLHLHSLD LSFHLNRQTG ALSKAIDRGT RGMSFVLSSL IFNLIPTAVE 240
  241 IGMVSALFTG TLGPEFAYMT MGSIGMYGIA TLGVTKWRTK FRHQMNQADN DAGNKAIDSL 300
  301 INYETVKYFN NEKFEADRYD HFLKKYEGAS LKTTSSLALL NFTQNAIFSG ALIGVMCMAG 360
  361 TRIAAGDLTI GDLILANTLL FQLSIPLNFL GSVYREVRQG LVDMNQMFSL LTLKPKIVEA 420
  421 ADAKRLEIVD NDISLKFENV HFGYLPEKPI LKGLDLEIPV GKKVAIVGGS GSGKSTIVRL 480
  481 LYRLYDTESG NVRINGLETR DLTLDSLRQS ISIVPQDSVL FHDTIFYNLA YGRPSASMEE 540
  541 VYQAAKLADL HESVLAMPNG YETLVGERGL KLSGGEKQRV AIARAILKNA PFVIYDEATS 600
  601 SLDAITESNI MKALKGAVEK RTSLFIAHRL ATIVDADIIY VLQDGKVAEK GSHFDLLAVD 660
  661 GLYAQLWKSQ NIHGVAPKKS KEEDDDLMLE LDLDKCCGSS SCNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle