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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: glr-3
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.80
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFWIAKTLIA FLILLKTDCY KIAIPANLID EVNPVLEFVD FRVQVIPYET KPLWRIKQES  60
   61 FKIVGISIEN GLFSVCNCLI LGASAIILPE QYDGHLAAAA IVQSIADNTN VPCVSLHLSP 120
  121 PTRPSTHLHP HLNAKSLAVA AFIKREKWKD VVVVFEEPDE LLEITDMITA GHFDPDSFSS 180
  181 QLVRLKHGDD YGNELKHIKN KLDRYRIVIN IPLQKALHFL EQAANMSMCG VLYHYVVMDM 240
  241 DLVTVDIDSI RGIEDCNITS FGVHDVNSEY IEDIRQEIVH KSSIRLPKKG VPYTTSIWID 300
  301 TLRLLIRSMK SIQIWDEPRC GSSWKSGSDI KKRFFENPLA GISGDLHWAP SGERSNYTLH 360
  361 VYRRTLSFQK FAEWSSRTRR IASSEAVVIA NSSEKLTLEG KHLKISVYLE APFVMITSNG 420
  421 SYEGYCIDLL HKIANILKFT YTIQKVRDNA YGSKESNGKW SGMVGELQRG DADLAVASLT 480
  481 ISYGRSEVID FTVPYMHLGI SILFKKPRIR DSDWFKFMDP LSTQVWIMTF ASYFVVSVAI 540
  541 WIIAKISPYE QFERDEDNGQ YKPVDNQFSL RNSFWFTVCS LMQQGSELCP RAASTRLLTG 600
  601 IWWFFALILI SSYTANLAAV LTTRRMETPI ENADDLAAQT KIKYGTLGRG STMSFFNESK 660
  661 IETYERMWQL MSSSPGLFVQ SSKEGIARVK SSDYAYLMES SMLEYAVERD CELMQIGGLI 720
  721 DQKGYGIGLP KGSPYRELIS TAILRLQEKT ELTELKEKWW KDKSVVCEQP KRKDQDDGES 780
  781 IGGIFIILVV GLVLTAVLVI FELITTRKPS PAQSQVIRHV NVIPSFKLGF FRWNVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle