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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: mua-3
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRLSLGILL LAAVTSIASD NSCGGRSRLG ANPCQDYSLH DCDPVAECFS EQPGYFQCQC  60
   61 PKGFTDSSAD KRFPGRKCVR AVDECALGRH TCDPHADCID THQGYTCKCR SGWSDTSLDP 120
  121 LRSPGRSCKK ADMCSNIDCA AEAECRETPI GPMCQCVSGY VDVSRQHGRP AGRVCRAVVN 180
  181 ECAEGRHDCS SHATCIDTAD GFTCRCKDSY RDESSDTLKH PGKNCVRTVQ PDPPECDVSD 240
  241 PMSCDPAKRE VCIFVENTYK CRCANGYSRL PDGRCVVINE CAEPRLNTCG KNAECIDLAE 300
  301 GYTCQCRSGY ADISPVSQPG RICRARVNEC SNKEKYNVDC SENAICADTE HSYSCRCRPG 360
  361 FADVSAAFNK LPGRRCIEAV NECASPSLND CSKNAFCEDA KEGYICTCRP GYVDNSPNAA 420
  421 RHPGRICTKP VEKIKTDLKD TSFSTDDGCD PKNPKCGANE ACVQRHGQHN CECVETAFRY 480
  481 TDGSCRVYSA CSKRNTCDKN AICLNRFDSY TCQCRPGYID LSADLTNAPG RICKELINEC 540
  541 ASSDNECSPY ARCIDATNGY ACQCLDGFID VSSRYNKPPG RQCTNSNNEC SEKSLNTCDE 600
  601 NADCVDTPDG YTCQCYGGFV DVSSNANLPP GRVCTVQTTC PKQKTDLVFL IDGSGSIGSY 660
  661 VFKNEVLRFV REFVELFEIG RSKTRVGLIQ YSDQIRHEFD LDQYGDRDSL LKGISETQYL 720
  721 TGLTRTGAAI QHMVQEGFSE RRGARPQQSD IARVAIILTD GRSQDNVTGP ADSARKLSIN 780
  781 TFAIGVTDHV LASELESIAG SPNRWFYVDK FKDLDTRLRS MIQKAACPSP TKQETPSEDV 840
  841 CNPRTQTGCD RSLNEHCAVE NGRPRCVCPE GFTRHPFTRV CGGDLCNPQL ITSCIFPEEC 900
  901 QITPYKNFRC SCPEGYNRDY RSGFCVSVKE VQISPQHDAN CHNGGVRCSE NERCTNDGSD 960
  961 WFCECLPGFE RIRNGQCAYP GSCNPNDPMS CDVRKRQQCL PRGNIYTCQC GRNEKRHPIT1020
 1021 DICLKNECLT GEHDCDRSAR CIDTDESYIC ACQSGFIDHS PNPSERPGRV CVALQNECLD1080
 1081 GSNRCSPNAL CTDTEEGYVC RCKSGFVDYS PNPQTFPGMV CKELVNECTN PRLNQCDRNA1140
 1141 HCIDTIEGYS CICKPGFVDM DEFGNPGRRC EQIKTNDKCS PGKNDCDRNA RCIQIGDDDY1200
 1201 SCACPPGFKD KSPSSSRPGR LCIPVIPECD NPTLNDCDSP DRAVCTDTDD GYMCRCRQGF1260
 1261 LDISPSISVK PGRLCKPLQN ECALGIDDCA RDGGICEDNP DSFTCRCAMN YLDVSFDRVT1320
 1321 RPGRKCKRLI NECQTGQNDC SEEATCTDTE DSYICACPQS HIDLSPDTVN RPGRRCLMRI1380
 1381 NECTSNRHDC SPNADCIDTP ESYKCRCRDD FVDESPDSSR RPGRICRPAL VDECRTGKHD1440
 1441 CHVNAICQDL PQGYTCQCSA DFVDVSPHRA SHPGRLCQPR PTPPPPECRL DGGNQCKVHL1500
 1501 NEVCRLMGGE PKCSCPVNYQ RDSSGSCSII NECLFTQLND CHTAADCIDQ VQGYTCQCRD1560
 1561 GFKDIGDRRR PGRMCKPMVN ECQYPHLNDC HQNAACIDLE EGYECKCNQG FMDHSHGRPG1620
 1621 RICKQLTNEC LRPSLNSCDR NARCIDKEEG YECECRDGFI DVSPSPTLKG RACRELVNEC1680
 1681 ANSRLNDCDK NARCKDTMDS YECDCPVNSK DISPSPSFPG RVCLMFINEC ESGVHDCDPS1740
 1741 ATCRDNEQSF TCECPSGFVD RSPNKHARPG RVCVKLVDEC REGRHTCSSH ADCRDLEEGY1800
 1801 TCECRDGYVD RSPNLASQPG RVCSAPEVCP PNHDCSSAAV CEPLGGMKYQ CVCIQGYVDQ1860
 1861 SPGSQKGRVC VRNNACHDPR LNTCSRNAIC YDEPRGYRCE CKRGFMDRSP DSSQRGRVCE1920
 1921 PPPPPSPPPR HPCQDPERND CHPAGTCRAT GAQSYTCECL SGYADRSPDP RNKPGRLCVL1980
 1981 TEPVCLDPEQ NDCHAAAICS EVNGPEKYTC KCRDGYTDES PDPLRRPGRI CKGLINECLD2040
 2041 RSLNDCHSLA VCKDLPNGYT CQCPINAKDQ SPDPRKPGRI CSLSVNECAN PSLNSCSAFA2100
 2101 DCFDEENGYR CRCRNGYHDD DPAHPGHRCS FMINECDSSN LNDCDRNANC IDTAGGYDCA2160
 2161 CKAPYRDEGP PQSPGRICRL NECLNPNRNT CDRNADCRDL DYGYTCTCRH GFYDQSPNPQ2220
 2221 EPGRICIEFQ QEEHIERVKV TTVQSEPRRE FPCGRDDCIK ARGEVCISGE YCGCKPGEGR2280
 2281 SASTGKCQEV QETPFELRVV TRDQRPLMYS TEFGSQKSPS YVEIVELFEK NMARTFGGTS2340
 2341 LAPRYVNTKV DYITHPKTKN SSWDQGLLFK YEVQTTKSQS QPIDECELWK QMQASLDRTN2400
 2401 GAIGGGSLRV ASDTDLLNPC KQQEEWGNCG GMSCKEHLKE VCIAGHICGC PDGMKRRDAN2460
 2461 SECRVVESWN VPLWVVRDKE KPIVFSESFD NPQTPVYKDY SKRLEKGIEG CYPHTELKNA2520
 2521 FVTAEVNDIV NPVLMNASYD TGLLFNTTVH FRKGMVHVPS DAYYQLIKYV TKENNNEVGD2580
 2581 SELYLNPTQP DPFNPCFKND CDPHGKCIEI SKYAYKCECG VGYRDINPQS PGKKCLPVHG2640
 2641 FNECERKEDN ECSENARCID LEHLYKCECL PSYYDTSPVG SVPGSLCVLD YCSDVNFCPT2700
 2701 NTTCKNMEQQ AECKCDAGFM DIRKSEKRTA LMLGDDTLCM HVRDVDECAL GLNNCSGVAH2760
 2761 CIDRAVGYTC KCPDGYIDGN PDEPGRVCGA LLCDLCNAHG DCVHNTATNN ITCVCTDGWT2820
 2821 GPQCQVAPSN ASLVLLILLA LLFLLLTLCC LLYFCTKCHC FKGRRFAGAG ANGFGYRRGG2880
 2881 AWPWSTLEGS ASSESGAEFS AMSAAGNDYY PDIGIPRAKL KSGMMASGNT AEVRNMEVAR2940
 2941 LDQYLDENAV RIPRAHLVDA HGDTSFDSLS EASSEYTIKE EIERKVITDV TTKEIKTTTT3000
 3001 TDEQGNTIVT TTEAVHPRDT TIVHGGGYTQ NESSSSSFSG GERAYQSQSQ QQQSMSQGMS3060
 3061 QSMSQHATSA GYSSSGMESS AHNSGYASIR HTGERERGGS EEEFSIGRAR GMAAASSGYQ3120
 3121 HSSSENREVE EYCSEEEDVE HSVGDKRTIV TKNHSYEPFV NGESERFKTE VVTSQTSTHV3180
 3181 TKK

YRC Informatics Platform - Version 3.0
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