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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: catp-5
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTSEREPLL DTTTRNRVYD TTDNPSTKIM KREKDNPKAK TTSFNQGKLN IGEETCDLYA  60
   61 YKETIGRQIL FWLLTIVTLG FYQLLAYWVK SLFVKVRFQP TSHDECEYVM VEDIHGTQTI 120
  121 KEVFKAESDV GLARPTRSGK QEKVKVMRFF TYRKIKYIWY EKDQEWLNPA DMDSAAPFNI 180
  181 YQKLTLDVIG LKEQDVIASR KIYNMNALAL ALTPILVILF KEVLGPFYLF QCFSVALWYS 240
  241 DNYAYYASVI VIITVGSAAV AVYQMRAQEK RIRNMVGDTI SVIVRRDGHD ITIDASEIVP 300
  301 MDILILPSNT FILPCDCLLM NGTVIVNEAM LTGESVPVTK ASLKEADECG PEIRLSSEHN 360
  361 RHTLFSGTTV LQTRNYKGQP VMARVIRTGF STLKGQLVRS IMYPKPQEKE ALKDVMVFIL 420
  421 VLGFIALIGF IYTVIEMVSR GESLKHIIIR SLDIITIVVP PALPAAMSVG IINANSRLKK 480
  481 KKIFCTSPTT VNVCGLINVA CFDKTGTLTE DGLDFNCLKA IRKNEDGKPE FTSEFEELDP 540
  541 VKLSAENANL NIVVAAASCH SLTRIDGTLH GDPLELILVE KSKWIIEEAV NSDEETQDFD 600
  601 TVQPTVLRPP PEQATYHPEN NEYSVIKQHP FNSALQRMSV IISTPSEHSA HDMMVFTKGS 660
  661 PEMIASLCIP DTIPEDYMEV VDEYAQRGFR LIAVASKAVH LNFAKALKTP RDIMESELEF 720
  721 LGLIVMENRL KDVTLSVINE LSVANIRCVM VTGDNLLTAM SVARECGIIR PTKKAFLITH 780
  781 SKTEKDPLGR TKLFIKESVS SSENDIDTDS EVRAFDRKAV LRTATYQMAI AGPTYSVITH 840
  841 EYPELVDRIT AMCDVYARMA PDQKAQLIGA LQEIGAKVSM CGDGANDCAA LKAAHAGISL 900
  901 SQAEASIAAP FTSNVPDIRC VPTVIKEGRC ALVTSYAVSK YMAAYSLNEF LSVMLLYNDG 960
  961 TNISDGQFLY IDLVLITLVA LFLGNTEASR KLSGIPPPRR LATSAFYFSV FGQMFFNIIT1020
 1021 QTTGYLLVRG QSWYVPNPEE LDNTTTMIGT TVFFTSCCMY LGYAFVYSKG HPYRRSVFTN1080
 1081 WLLCGIIFVI GAINMVMIFT NMGFLMNLMG FVYVPSTSMR FILLAISLAG VFLSLLYEHF1140
 1141 FVEKVVAIHF ESYLRQRRLR NGDPSLSAYE KILAAIGSSP RWFEDEINLS KSIDRKETIE1200
 1201 SKC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle