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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE37028
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATTEEKKF LITPINLSDL DTSPGAHANH TYEGSDPEEP EEVDIHIPND TQSLCVSTGR  60
   61 DEDEGRSITP NNMAYEFIPL IYSEPALFNM PDISYNLHKS FAASDTLLPH MRVVADEMRN 120
  121 TSASVTAEPE PSVSHAPSVL TVTAPEDRNM YQSDISIRQG HKPSFSTREI REQHQKVQQI 180
  181 YRDVNKKERK EGKPTDPIDF EGILNIIGGC RWWQIWIYVL IALQQIPHAM FNLNVVYMMY 240
  241 DPEFQCMVPG FNDTNDTTIS SHGPYLWGVD DIKNISFVFP NANSDGAYQR DSCYFYERSE 300
  301 ERYRQLRRMP LETAMSEAWK DVAPKKKCQA YHFEKDVMVE TIVTDFNLVC DSWFAKGHAH 360
  361 MFYSIGYLLG CVLGGIASDK IGRKPTIIGF GILSSMLGVF LPFNDYYPMF LLIRLLSAIC 420
  421 NEAADLAAYT LCMEITGTKY RAMVGSMLQA PWALGYALLA LIAYLTKSWK TIQVIAAGLH 480
  481 FMSIIFICSI PESPRWLMVQ NRVSEAEEVI RKACREPPFP FNMCTTSKCG NLPSDLELVS 540
  541 HRERKLNKKN GGKIGFLDLF TMKELRYRTI SVCIVFMATA LVYYGLVMAL SDQSAPGRTL 600
  601 FTGYFHLNNG IAGAIEIPTL FACVWMMQLG RKKALMLTLI TSGLFIIVAM LSMVSGHYML 660
  661 ALAFMYFGKI AVQGAFNILY IFTSELYPTV VRNTAVGVTS MVARFGSGLS SYIALLSNIS 720
  721 LPIVPMIIFA VFSLFAGMLV FVLPETSEKP LPETLDDAIN FLEPTKQVNC MMGRFGVFGH 780
  781 QKMTKSISLT ENPSTNDIAD LKPLSRRSSA ITRRMTERAS VIYSRNASRT NSIVQDIQDI 840
  841 QIPSDFKMPD LVSTDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle