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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ptr-10
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLGFGCLEP KAAKFFHSYG LLVSGYPFIF LVSPILVTCF LATGLIGLEP LSDALYLYTP  60
   61 TDAPSKTERR IIHDAWPLVD GTFVAGRAVT QSREVQVAVV ARSGGNILDR VFSNELKLME 120
  121 SFIRNNITVQ FSNRTWSFAD LCLAGPDGRC ANNDHIQLAS RLHQHGINIT YPTVRLSDKS 180
  181 AYIASALGGV KLAKGDNGEN IIVEATAWLL IYQLKFYPNE ISYVSGLWER EFKNKMDEYK 240
  241 KQAKYISITY FHSQTLSDEL NRNAERLAPK FIGAFVILVC FSVLCSIVTI KGSGYIDWVV 300
  301 TKPILSVLGV SNAGMGIASA MGMLTYLEIQ YNDIIAVMPF LVVAVGTDNM FLMVASLKRT 360
  361 DRNLKYDQRI AECMADAAVS ILITALTDAL SFGVGTITTI PAVQIFCIYT MCALLLTFAY 420
  421 QLTFFCAILV YYTRIEEQGL HSIWLRPAVT YSSTSPLNVK LFWLGSQPQK PLPSCGTVSS 480
  481 TSSVSTMTSQ ATSPASKHLH HCAATSFFRN WYAPVLMQPW IRAIAGLWYL IYLGISIYGC 540
  541 THLKEGLEPA NLLVDDSYAT PHYRVLEKHY WHYGASLQIV VSNPPDLRDP VERINMDKMA 600
  601 STFANCKVAI GDDSVQFWLR EMQVSEEIHK IQYDNEKFYD HAAQYIYSDM SQPWVVDVVW 660
  661 GRNNNSERII KTFRFMIGMR DISTTTKQTE ATNTFREIAS RFEQYNVTTY MPLWLFTDQY 720
  721 ALVVPNTMQD IIVAVACMLV ISALLIPQPV CSFWVAVTIG SIDLGVLGFM TLWNVNLDAI 780
  781 SMITIIMSVG FSVDYSAHIT YAYVISKEST TSARVCDALG DLGWPVAQGA MSTILAVSVL 840
  841 SDVPAYMIVT FFKTVFLAIS IGFLHGLVFL PLMLSVFVGC CSSNKIETKS VKEPRFVGRY 900
  901 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle