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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cle-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIETGSQYLL FLLFICSLFN SGSTALQHED RVPNAPQNVR IKTQSTSATL WWDAPPDPTV  60
   61 LIRGYTVEYG EGSISQRILI EGPDSTSFTV TRLSPNTNYV FAVSAYNEAE GEDGTKVMVA 120
  121 AKTRPSEGSQ TEKLWPPTSV RARIDEKSAA GSAFVSWDDP NPESSSENSI DSTQKQYVIN 180
  181 YGIYESDTQQ KVRSNAKAVR LTGLIPGKEY EVAVKVVAGD GRESPWSIRD LFLVPETKTV 240
  241 SKFDWFCRLN DTEMCSIHSS PHWKLCSEKH DTYTQRDAGA CPRVQYPSSP AHLTTPAINL 300
  301 PDAQRLCLYF RFALLNFHPG QMKVEIFRDG DMANKQIVWK TRMANVRTHV VQNVYVPFSQ 360
  361 QIKPFKVSVS LKWDGQPMPR VIVHEMDVLS GGCSERSTDS ETEVDLLAPV KASLNADARV 420
  421 FRAKGIESLP AIGLQRGVEI AVPYRLYLPR NFFKQFSLLA TIKPMDKRGG YLFAAVNAYD 480
  481 SAVDIGLLIE PAGTKQTNIS LIVRSVAIVS FLVEDFSQQW TQFALEVVDQ TVTFYFKCRR 540
  541 FASRQVTSLP DFSFDEAEKL YIASAGPIID NGFEGAIQEL KLIDDATQGS RQCDEQWWRR 600
  601 RKIEKELQGR KGAEGSGTPE EFKKTQESSE LQKISDFPPT PAPPPPYPTP QLAPHDLFLS 660
  661 DDSLVVPFIG GYGSPAARDL RSYEQQAATT PFQGAPPSNQ CTQVCRGEPG PQGPSGNDGI 720
  721 PGSHGAPGHQ GERGADGAPG LHGSRGDQGL PGPPGMPGLA GPPGPPGSGT GHGSGADGPQ 780
  781 GPPGLPGAPG RDGTSGVEGQ RGPQGPPGPK GDDGVSMESL TDDDIERIAR RVASIQKESN 840
  841 EPMRGDLPEY NSKVHSFTTK GEKGERGAPG APGAPAPPAY GTLTTGTAVN VHATTVELFA 900
  901 SARSTSVGQL AFATSSQQLF IRVTNGWKEI QLTHFHPFVE TRHSTQNSRQ NDASHAGRSR 960
  961 TGSAAAPWYP KANLDEPQRD AGVHNKDRVI HMIALSQPFS GNLHGLRGAD LQCYREARAA1020
 1021 GYTTTFRAML SSNVQDLVRI VHSVDFDTTV VNVAGHHLFP SWRSFVNGAQ MNPHAKLFSF1080
 1081 DRHDVLNDSR WPDKRVWHGS KDGGIRAEQY CDGWRRADSS LTSLAGHISS NTSIFQSSGS1140
 1141 EKCENKLVVL CVENMSKYHG DRILRLHRIT SDFKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle