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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cle-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIETGSQYLL FLLFICSLFN SGSTALQHED RVPNAPQNVR IKTQSTSATL WWDAPPDPTV  60
   61 LIRGYTVEYG EGSISQRILI EGPDSTSFTV TRLSPNTNYV FAVSAYNEAE GEDGTKVMVA 120
  121 AKTRPSEGSQ TEKLWPPTSV RARIDEKSAA GSAFVSWDDP NPESSSENSI DSTQKQYVIN 180
  181 YGIYESDTQQ KVRSNAKAVR LTGLIPGKEY EVAVKVVAGD GRESPWSIRD LFLVPETKTV 240
  241 SKFDWFCRLN DTEMCSIHSS PHWKLCSEKH DTYTQRDAGA CPRVQYPSSP AHLTTPAINL 300
  301 PDAQRLCLYF RFALLNFHPG QMKVEIFRDG DMANKQIVWK TRMANVRTHV VQNVYVPFSQ 360
  361 QIKPFKVSVS LKWDGQPMPR VIVHEMDVLS GGCSERSTDS ETEVDLLAPV KASLNADARV 420
  421 FRAKGIESLP AIGLQRGVEI AVPYRLYLPR NFFKQFSLLA TIKPMDKRGG YLFAAVNAYD 480
  481 SAVDIGLLIE PAGTKQTNIS LIVRSVAIVS FLVEDFSQQW TQFALEVVDQ TVTFYFKCRR 540
  541 FASRQVTSLP DFSFDEAEKL YIASAGPIID NGFEGAIQEL KLIDDATQGS RQCDEQWGAE 600
  601 GSGTPEEFKK TQESSELQKI SDFPPTPAPP PPYPTPQLAP HDLRSYEQQA ATTPFQGAPP 660
  661 SNQCTQVCRG EPGPQGPSGN DGIPGSHGAP GHQGERGADG APGLHGSRGD QGLPGPPGMP 720
  721 GLAGPPGPPG SGTGHGSGAD GPQGPPGLPG APGRDGTSGV EGQRGPQGPP GPKGDDGVSM 780
  781 ESLTDDDIER IARRVASIQK ESNEPMRGDL PEYNSKVHSF TTKGEKGERG APGAPGAPAP 840
  841 PAYGTLTTGT AVNVHATTVE LFASARSTSV GQLAFATSSQ QLFIRVTNGW KEIQLTHFHP 900
  901 FVETRHSTQN SRQNDASHAG RSRTGSAAAP WYPKANLDEP QRDAGVHNKD RVIHMIALSQ 960
  961 PFSGNLHGLR GADLQCYREA RAAGYTTTFR AMLSSNVQDL VRIVHSVDFD TTVVNVAGHH1020
 1021 LFPSWRSFVN GAQMNPHAKL FSFDRHDVLN DSRWPDKRVW HGSKDGGIRA EQYCDGWRRA1080
 1081 DSSLTSLAGH ISSNTSIFQS SGSEKCENKL VVLCVENMSK YHGDRILRLH RITSDFKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle