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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: sax-7
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.57
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLRETMGRG GPPNTTTFIF LLGCLLFLVS DRYYTCTAEN IELKDYKFGN QFSLQITNNK  60
   61 RRSLQQMPPT EQYVNQSSPI ALQGNQHKLH CFFSGYPAPK PRWFHNGREI SEDSDAAGFR 120
  121 FESYGKTLVF NVTQDKAGKY DCRFATQQDI DRTFNVVVEA APYWPLGPPP NTNTSEGEKV 180
  181 IFDCTTYGKP TPKVTFYKNG VEIESQKDDR YLIEGTRLTI FDVKKGTYGK GDNAVYQCKS 240
  241 ENKHGWLWTN FYLNLLAFKP QLLIDPGKEE VEAVAGKKVT LECKFFASPN AAVKWEAPMI 300
  301 SGSKGNQIPA DAYGVGKLVF SEVTAAEEGE YECIGTNKYG QATGLITLKV RKPTIVQPFP 360
  361 RVEEVRMAGE EMRLACDATA DNQLEVKYEW LVDGKSLPED RISSGHYKID DDHSLVISNP 420
  421 TQDDTAKYKC VVSTKLDQVE KEIKIQFKDV PVAVHSAWVQ TCDKNSLTAF IKFEHYESIH 480
  481 TIAPIKEFWV QYQIDSETEG SQWRTHPVPS AAHPNDKIDN NLRHTTGDAT VSLQPFGKYV 540
  541 FRVIARNSVG DSAARLAKDQ CETPAKQPDK NPDEVAAKGT SPENIIVQWK PMSREEWNGA 600
  601 DFHYVVKYRP KDEDQRVGDW KEVAVEDPFA DRVTVNLDDE KDVKPFQPYE VQVQAVNSEG 660
  661 RTNVVPETVE GRTGEGVPSS IPSGLRVLEK SGTTVTLAWN GVDPQTANGN FTGYKITYWV 720
  721 DEADQDSDDS SEDDEDDEKR KFRWKRSIRV KRQSGIRKTV VFGPSATQGT LTDLKPATLN 780
  781 HAYIQVTNGA HEGSASDTID FQTDEGVPSP VRSLRAYPMN SKVGGEKGVV VLVWKKPRQT 840
  841 NGKLARYEVE YCKTQNGKLV EKSCPRKQID ADSKEIRITG LENETPYRFI LRAHTSAGEG 900
  901 DPNSSDATTL PETTAAGVDP GVPSLVENAI GDKYFNVSFR PAKYDDESRA PVGNTYEVQY 960
  961 KPQDADEWET VKPADDGLTV HVDGLSPGTK YDVRVAALQV DPEGGETTKT LSGISKITTT1020
 1021 GTSSRERNVY LLILLLLILL LLLIICCICC VVCRQRGQNY PVSQREREQG REPILGKPDY1080
 1081 KTDDDEKRSL TGSKAESETD SMAQYGDTDP GVFTEDGSFI GQYVPQKSLM PAERPEKGST1140
 1141 STFV

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