YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PPA10_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRVRKSDFG SIVLVLCCVL NSLLCNGGIT SRYVRKLEAT VDMPLDSDVF RVPCGYNAPQ  60
   61 QVHITQGDVE GKAVIVSWVT QEAKGSNKVI YWKENSTKKH KAHGKTNTYK FYNYTSGFIH 120
  121 HCPIRNLEYD TKYYYVLGVG QTERKFWFFT PPEIGPDVPY TFGLIGDLGQ SYDSNITLTH 180
  181 YENNPTKGQA VLFVGDISYA DTYPDHDNRR WDSWGRFAER STAYQPWIWT TGNHELDFAP 240
  241 EIGENRPFKP FTHRYRTPYR SSGSTEPFWY SIKRGPAYII VLASYSAYGK YTPQYQWLEE 300
  301 EFPKVNRTET PWLIVLMHSP WYNSYDYHYM EGETMRVMYE AWFVKYKVDV VFAGHVHAYE 360
  361 RSERVSNIAY NVVNGICTPV KDQSAPVYIT IGDGGNIEGL ATKMTEPQPK YSAFREASFG 420
  421 HAIFSIKNRT HAHYGWHRNH DGYAVEGDRM WFYNRFWHPV DDSPSCNS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle