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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DGK2_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMEVGFSLIQ WLISSGADSP FIFGWLVTGS VGLLAVIYTF LKWQKKTSLN WVKAAAREKK  60
   61 KVWKRLRVPL SHHQWTDDYG YGQQPSTCCV CLYSLVPGQN VSNKASLSIP VHRCAVCGVA 120
  121 AHFYCSSSAA KDCKCVAQAG SDHVRHHWSE RWVNMDDNAD MTAFCFYCDE PCGIPFIEAS 180
  181 PMWHCLWCQR LIHVKCHMIM SKESGDACDL GSLRRVILSP VHVKLNEANG VDGVLTTIKN 240
  241 ELASIRGHVR RKRHRGKNGN GQSLNGKLLE DSVSDPVKTV VNGLVVKKLR RDRSIDCLKQ 300
  301 VSDMPNAKGL QNGIGGHKRN KSAALNFMKK FSLVDLPPDA RPLLVFINAK SGGQLGPFLH 360
  361 RRLNMLLNPV QVFELGSCQG PDAGLDLCSK VKYFRVLVCG GDGTVAWVLD AIEKRNFESP 420
  421 PPVAILPLGT GNDLSRVLQW GRGISVVDGQ GSLRTFLQDI DHAAVTMLDR WSVKIVEEST 480
  481 EKFPAREGHK FMMNYLGIGC DAKVAYEFHM MRQEKPEKFC SQFVNKLRYA KEGARDIMDR 540
  541 ACADLPWQVW LEVDGKDIEI PKDSEGLIVL NIGSYMGGVD LWQNDYEHDD NFSIQCMHDK 600
  601 TLEVVCVRGA WHLGKLQVGL SQARRLAQGK VIRIHVSSPF PVQIDGEPFI QQPGCLEITH 660
  661 HGQVFMLRRA SDEPRGHAAA IMNEVLLDAE CKGVINASQK KVLLQQMALH LS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle