YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10120437, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIKPGLSAL VTGGASGIGR ALCLALAEKG VFVTVADFSE EKGQETTSLV REANAKFHQG  60
   61 LSFPSAIFVK CDVTNRGDLL AAFDKHLATF GTLDICINNA GISTPLRFDK DDTDGSKSWK 120
  121 HTINVDLIAV VEGTQLAIKA MKAKQKPGVI INMGSAAGLY PMPVDPIYAA SKAGVVLFTR 180
  181 SLAYYRRQGI RINVLCPEFI KTDLAEAIDA SILESIGGYM SMDMLIKGAF ELITDEKKAG 240
  241 ACLWITKRRG LEYWPTPMEE TKYLVGSSSR KRPSFKVSTK IEFPQSFEKM IVHTLSHKFR 300
  301 SATRIVRAPL QLPIGPHQVL LKIIYAGVNA SDVNFSSGRY FTGGSPKLPF DAGFEGVGLI 360
  361 AAVGESVKNL EVGTPAAVMT FGAYSEYMIV SSKHVLPVPR PDPEVVAMLT SGLTALIALE 420
  421 KAGQMKSGET VLVTAAAGGT GQFAVQLAKL SGNKVIATCG GSEKAKLLKE LGVDRVIDYK 480
  481 SENIKTVLKK EFPKGVNIIY ESVGGQMFDM CLNALAVYGR LIVIGMISQY QGEKGWEPAK 540
  541 YPGLCEKILA KSQTVAGFFL VQYSQLWKQN LDKLFNLYAL GKLKVGIDQK KFIGLNAVAD 600
  601 AVEYLHSGKS TGKVVVCIDP AFEQKTSRL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle