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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ERO1_ARATH
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKGAIKEEE SEKKRKTWRW PLATLVVVFL AVAVSSRTNS NVGFFFSDRN SCSCSLQKTG  60
   61 KYKGMIEDCC CDYETVDNLN TEVLNPLLQD LVTTPFFRYY KVKLWCDCPF WPDDGMCRLR 120
  121 DCSVCECPEN EFPEPFKKPF VPGLPSDDLK CQEGKPQGAV DRTIDNRAFR GWVETKNPWT 180
  181 HDDDTDSGEM SYVNLQLNPE RYTGYTGPSA RRIWDSIYSE NCPKYSSGET CPEKKVLYKL 240
  241 ISGLHSSISM HIAADYLLDE SRNQWGQNIE LMYDRILRHP DRVRNMYFTY LFVLRAVTKA 300
  301 TAYLEQAEYD TGNHAEDLKT QSLIKQLLYS PKLQTACPVP FDEAKLWQGQ SGPELKQQIQ 360
  361 KQFRNISALM DCVGCEKCRL WGKLQVQGLG TALKILFSVG NQDIGDQTLQ LQRNEVIALV 420
  421 NLLNRLSESV KMVHDMSPDV ERLMEDQIAK VSAKPARLRR IWDLAVSFW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle