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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: XXT5_ARATH
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQDGSPAHK RPSGSGGGLP TTTLTNGGGR GGRGGLLPRG RQMQKTFNNI KITILCGFVT  60
   61 ILVLRGTIGV GNLGSSSADA VNQNIIEETN RILAEIRSDS DPTDLDEPQE GDMNPNATYV 120
  121 LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI 180
  181 DYCRLHGIEI VYNMAHLDKE LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI 240
  241 PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE 300
  301 AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM 360
  361 IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM ERAFNFADNQ VLKLYGFSHR 420
  421 GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle