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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SAC8_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIAPSTSRF KLYDQFELLE FPDKYVVKPI ESPEEGFSVN RRDGNIKPLD ENASSGSPTR  60
   61 VSTIYGVGGT IRLLAGTYLL VITSREEVGN FLGLPIFRVT AMKFLPCNEA LRFATAQEKK 120
  121 DETYFRTLLQ ALETTPGLYF SYETDLTLNL QRRCKLAEGW NRKPMWKQAD PRYVWNWHLL 180
  181 EDLIECKLDG FIIPILQGSY QVAELKLKNS PAVVSIMSRR CTRRLGTRMW RRGANLEGDA 240
  241 ANFVESEQIV EINGFKFSLL QVRGSIPLLW EQIVDLSYKP RLKINKHEET PKVVQRHFHD 300
  301 LCQRYGEIMA VDLTDQHGDE GALSKAYATE MEKLPDVRYV SFDFHQVCGT TNFDNLGVLY 360
  361 EQIGDEFEKQ GYFLVDADEN ILEEQKGVIR SNCIDCLDRT NVTQSFMGQK SLNLQLQRIG 420
  421 VCDSTECIST FEDDYTKFRT IWAEQGDEVS LQYAGTYALK GDLVRYGKQT MTGAIKDGLS 480
  481 AMSRYYLNNF QDGVRQDALD LISGRYTVGT HSPSQLQPIG SQPSFLPVAS ALLIGGVTVT 540
  541 SFTIHQAGRN TQQYLASALW AGVTAGVVAM IKANGRHLTS RPRLCHLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle