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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y4374_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALRIYLWS LCLSLCLIIY GANSDPLEDK RALLEFLTIM QPTRSLNWNE TSQVCNIWTG  60
   61 VTCNQDGSRI IAVRLPGVGL NGQIPPNTIS RLSALRVLSL RSNLISGEFP KDFVELKDLA 120
  121 FLYLQDNNLS GPLPLDFSVW KNLTSVNLSN NGFNGTIPSS LSRLKRIQSL NLANNTLSGD 180
  181 IPDLSVLSSL QHIDLSNNYD LAGPIPDWLR RFPFSSYTGI DIIPPGGNYT LVTPPPPSEQ 240
  241 THQKPSKARF LGLSETVFLL IVIAVSIVVI TALAFVLTVC YVRRKLRRGD GVISDNKLQK 300
  301 KGGMSPEKFV SRMEDVNNRL SFFEGCNYSF DLEDLLRASA EVLGKGTFGT TYKAVLEDAT 360
  361 SVAVKRLKDV AAGKRDFEQQ MEIIGGIKHE NVVELKAYYY SKDEKLMVYD YFSRGSVASL 420
  421 LHGNRGENRI PLDWETRMKI AIGAAKGIAR IHKENNGKLV HGNIKSSNIF LNSESNGCVS 480
  481 DLGLTAVMSP LAPPISRQAG YRAPEVTDTR KSSQLSDVYS FGVVLLELLT GKSPIHTTAG 540
  541 DEIIHLVRWV HSVVREEWTA EVFDIELLRY TNIEEEMVEM LQIAMSCVVK AADQRPKMSD 600
  601 LVRLIENVGN RRTSIEPEPE LKPKSENGAS ETSTPSEI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle