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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3549665, gi|7...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLVEICYF SRYFCSNANS PYHHHRPHNT KLYSISSTTT RSHISPAMPS LSTPPSQNLA  60
   61 FSPAASATSS RLTPSSKRSF YPHRLPDPTA LCRCSSSSGS NSSSSSSSDD NPRWDSAIQD 120
  121 VLKSAIKRFD SVLSWYATLD NDDGEQGSEN VEKIDDDWDW DRWKKHFDQV DDQDRLLSVL 180
  181 KSQLNRAIKR EDYEDAARLK VAIAATATND AVGKVMSTFY VITRVVIIVS NNTRALLEER 240
  241 YKDAVYLRDK AGAGLVSSLF VFFLVSFITV VGWWSGISED VKDPFGLIVQ ITAEHGRYVA 300
  301 RSYNPRQLST SAAGAPLFEI FLTLDGKGNY KKQAVYLKWK EIFPDVPTMP SRTLTPGRFL 360
  361 TSPGRKEDTG NLAVESSEDE ESDNSDDDSD LLEESSGFQS FLRDMIPGVK VKVMKVTAPG 420
  421 RVDKDFISKV IEQIADEEDE ENDLDIEDID VEDDTKAEID EKNADIELES VTDEIIDNNG 480
  481 GREIAVKFVI GDIVDRLSGN QPLKESLRSP ANLESVENSS FYLRLEKDLN VKESKGVEGT 540
  541 TLVDGKGSRQ SRRRIENIMG DLAKSIEKEK KISVKMLKDV GELLSLTLSQ AQNRQQLSGL 600
  601 TKFRRIDVTP SLDPLDGLYI GAHGLYTSEV IHLKRKFGQW KGGKESKKPT DIEFYEYVEA 660
  661 VKLTGDPYVP AGKVAFRAKI GRRYELPHKG LIPEEFGVIA RYKGQGRLAD PGFRNPRWVD 720
  721 GELVILDGKV PLFVSQYTKT NLSMDSNSNK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle