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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PTR38_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGSVSRDAE ALKSADSSTR RSGGRITFPF MIVTLFGLTL ATLGWLQNLI VYLIEEYNMK  60
   61 SIAAAKILNI FSGFTFMFPA IGAIAADSFF GTIPVILVSS FISLVGVVLL ALTTLFDSLR 120
  121 PQACETASKL CQAPTNIQLG VLYTAITLGC VGAGGLRFTL ATAGANQYEK TKDQGSFFNW 180
  181 FFFTWYLAAS ISATAIVYAE ENISWSFGFG LCVAANLLGL IVFISGKKFY KHDKPLGSPF 240
  241 TSLLRVIFAA IRKRKAVVST NEKDYHSESK KTPTKSFRFF NRAALKQDDE VNSDGTIHNQ 300
  301 WRLCSVQQVE DFKAVIRIIP LVLAILFLST PIAMQLGLTV LQGLVMDRRL GPHFKIPAGS 360
  361 LQVITLLSTC LFIIVNDRFL YPFYQKLTGK FPTPIQRVGI GHVFNILSMA VTAIVEAKRL 420
  421 KIVQKGHFLG SSSVADMSVL WLFPPLVIVG IGEAFHFPGN VALCYQEFPE SMRSTATSIT 480
  481 SVLIGICFYT STALIDLIQK TTAWLPDDIN HGRVDNVYWI LVIGGVLNLG YFLVCSWFYK 540
  541 YRNLENADHE QDANVSH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle