YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ENT4_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	18	0.92
Transmembrane Helix	19	38	0.92
Non-Cytoplasmic	39	55	0.82
Transmembrane Helix	56	74	0.94
Cytoplasmic	75	84	0.91
Transmembrane Helix	85	105	0.93
Non-Cytoplasmic	106	111	0.84
Transmembrane Helix	112	132	0.92
Cytoplasmic	133	146	0.83
Transmembrane Helix	147	169	0.87
Non-Cytoplasmic	170	183	0.91
Transmembrane Helix	184	206	0.93
Cytoplasmic	207	261	0.96
Transmembrane Helix	262	284	0.87
Non-Cytoplasmic	285	291	0.89
Transmembrane Helix	292	311	0.88
Cytoplasmic	312	326	0.84
Transmembrane Helix	327	346	0.85
Non-Cytoplasmic	347	352	0.79
Transmembrane Helix	353	376	0.89
Cytoplasmic	377	387	0.80
Transmembrane Helix	388	412	0.90
Non-Cytoplasmic	413	418	0.88

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADGYENHAP ENLQGKYQAM VVCCILGIGS LFSWNSMLTI ADYYYQVFPD YHPSRVFTLI  60
   61 YQPIALGTIM ILAYRESKIS TRKRILTGYI LFTISTFLLI VLDLTTKGHG GIGHYIVLCT 120
  121 IVASFGLADA TVKGGLVGDL SLMCPELIQS YMAGSGMAGA LTSVLRLITK AAFEKSNNSL 180
  181 RKGAMIFLAI STFIELLCVI LYAYVFPKLP IVKYYRRKAA SEGSKTVVAD LAAAGIQNLS 240
  241 DLSDDDSKNQ MLRKKELLLQ NIDHAVNLFL IYVLTLSIFP GFLYENTGQH GLGDWYALIL 300
  301 VATYNFWDLF GRYAPLVKWL KLENRKALTI AVLTRYFLVP AFYFTAKYGD KGWMIMLVSI 360
  361 LGLTTGHLTV CIMTIAPNGY KGPEKNALGN LLVVFILGGA VVGISLGWLW LIGKKYAF