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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GAUT7_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGGGGGGGG GGGGKRRWKV LVIGVLVLVI LSMLVPLAFL LGLHNGFHSP GFVTVQPASS  60
   61 FESFTRINAT KHTQRDVSER VDEVLQKINP VLPKKSDINV GSRDVNATSG TDSKKRGLPV 120
  121 SPTVVANPSP ANKTKSEASY TGVQRKIVSG DETWRTCEVK YGSYCLWREE NKEPMKDAKV 180
  181 KQMKDQLFVA RAYYPSIAKM PSQSKLTRDM KQNIQEFERI LSESSQDADL PPQVDKKLQK 240
  241 MEAVIAKAKS FPVDCNNVDK KLRQILDLTE DEASFHMKQS VFLYQLAVQT MPKSLHCLSM 300
  301 RLTVEHFKSD SLEDPISEKF SDPSLLHFVI ISDNILASSV VINSTVVHAR DSKNFVFHVL 360
  361 TDEQNYFAMK QWFIRNPCKQ STVQVLNIEK LELDDSDMKL SLSAEFRVSF PSGDLLASQQ 420
  421 NRTHYLSLFS QSHYLLPKLF DKLEKVVILD DDVVVQRDLS PLWDLDMEGK VNGAVKSCTV 480
  481 RLGQLRSLKR GNFDTNACLW MSGLNVVDLA RWRALGVSET YQKYYKEMSS GDESSEAIAL 540
  541 QASLLTFQDQ VYALDDKWAL SGLGYDYYIN AQAIKNAAIL HYNGNMKPWL ELGIPNYKNY 600
  601 WRRHLSREDR FLSDCNVNP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle