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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|5596480, gi|7...
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLLERRQLC DSCEGSDSCE IDGHVGKETT PKLFNRARIL GSVLNGLLPC TIILLTIDAN  60
   61 FGPMIANLRR ARFRVILVKS IRSRAFKLEP DSRNPYPPWD FEGLEHNFYE MFATISQLIP 120
  121 FEFSLYMIHQ HAVESIFLND ADDDEWVMII ITHYHLDLDK TEMIECKAVA AIRDLICPRL 180
  181 GIIRSSSEGA VEIHIMVLLV EAAWFLESLT EKVLAVKGRA PPQHQVFVSF RGSDVRYNFF 240
  241 SFLKDALIKN GINVVTDEDA PRGKPIDENL LKLIKDSRIA VVIFSENYPE STWCLDELVE 300
  301 IEKQMDLKML DSCPIFFEVE TCHVKLQVAR STFNYNLLQL EHDERKKARQ ISKKAWEDAE 360
  361 KRFEGWRKAL ISVASRLGLT YKKGSNQATF VNEIVEKVKA MLDNVSSSHI TPQHQVYISF 420
  421 RSREIRNKFS SLLRAALRRS GINVLLDDEN ITRIESRDEV DRLFCRVSRV KDRTSVHYQN 480
  481 LQELDVVLEE TAGDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle