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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK3_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.82
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPILTLLLLI LGLFISPSVS DSRGDTVAQI CNNRTTTPQQ RSLFVTNFLA AMDAVSPLVE  60
   61 AKGYGQVVNG TGNLTVYAYG ECIKDLDKKD CDLCFAQIKA KVPRCLPFQK GTRGGQVFSD 120
  121 GCYIRYDDYN FYNETLSLQD RTVCAPKEIT GVNRTVFRDN AAELVKNMSV EAVRNGGFYA 180
  181 GFVDRHNVTV HGLAQCWETL NRSGCVECLS KASVRIGSCL VNEEGRVLSA GCYMRFSTQK 240
  241 FYNNSGNSTS DGNGGHNHLG VILAVTSSVV AFVLLVSAAG FLLKKRHAKK QREKKQLGSL 300
  301 FMLANKSNLC FSYENLERAT DYFSDKNKLG QGGSGSVYKG VLTNGKTVAV KRLFFNTKQW 360
  361 VDHFFNEVNL ISQVDHKNLV KLLGCSITGP ESLLVYEYIA NQSLHDYLFV RKDVQPLNWA 420
  421 KRFKIILGTA EGMAYLHEES NLRIIHRDIK LSNILLEDDF TPRIADFGLA RLFPEDKTHI 480
  481 STAIAGTLGY MAPEYVVRGK LTEKADVYSF GVLMIEVITG KRNNAFVQDA GSILQSVWSL 540
  541 YRTSNVEEAV DPILGDNFNK IEASRLLQIG LLCVQAAFDQ RPAMSVVVKM MKGSLEIHTP 600
  601 TQPPFLNPGS VVEMRKMMMT PTTNQSNSSG SRSDYITEGS SFFEPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle