YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ENT5_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	16	0.94
Transmembrane Helix	17	38	0.89
Non-Cytoplasmic	39	55	0.88
Transmembrane Helix	56	75	0.92
Cytoplasmic	76	85	0.89
Transmembrane Helix	86	105	0.96
Non-Cytoplasmic	106	111	0.82
Transmembrane Helix	112	132	0.91
Cytoplasmic	133	146	0.81
Transmembrane Helix	147	168	0.89
Non-Cytoplasmic	169	183	0.91
Transmembrane Helix	184	206	0.94
Cytoplasmic	207	264	0.96
Transmembrane Helix	265	285	0.91
Non-Cytoplasmic	286	292	0.82
Transmembrane Helix	293	311	0.92
Cytoplasmic	312	327	0.89
Transmembrane Helix	328	347	0.92
Non-Cytoplasmic	348	353	0.85
Transmembrane Helix	354	375	0.91
Cytoplasmic	376	388	0.88
Transmembrane Helix	389	413	0.89
Non-Cytoplasmic	414	419	0.93

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVARFENQAP ENLHGKYQAM VVCCILGIGS LVSWNSLLSV GDYYYQVFPD YHPSRVLTFV  60
   61 YQPFSIGTIV IFAYNESKIN TRKRNLIGYI VFTTSIFLLI ILDLATKGHG GIGPYIVLCA 120
  121 IVGSFGFADA SVRGGMIGDL SLMCPELIQS FVAGLAVAGA LTSAFRLITK AAFEKTHDGL 180
  181 RKGAMIFLAI STLVEFLCVL LYAYVFPKLP IVKYYRSKAA SEGSKTVYAD LAAAGIQNQS 240
  241 VLTADDVSKD KRLNNKELLL ENVDYVVNLF LIYVLTLSIL PGFLYENTGQ HGLGSWYALV 300
  301 LIAMYNWWDL VGRYIPMVKW LNVENRKGLT VAVLTRFLLV PAFYFTAKYG DQGWMILLVS 360
  361 ILGLTNGHLT VCILAKAPRG YTGPEKNALG NLLVLFILWG AFVGCALGWL WLIGKKNAF