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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PMTN_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISVQHVVV LLLSTLLIAI TFFLFTSDNA RFPFPSLSTT DYYTPIPKSP IPHRIVDVSS  60
   61 DQTPQKMKLN TSLEVGELKW DLCKGAESVD YIPCLDNYAA IKQLKSRRHM EHRERHCPEP 120
  121 SPKCLLPLPD NYKPPVPWPK SRDMIWYDNV PHPKLVEYKK EQNWVKKEGE FLVFPGGGTQ 180
  181 FKFGVTHYVE FIEKALPSIK WGKNIRVVLD VGCGVASFGG SLLDKDVITM SFAPKDEHEA 240
  241 QIQFALERGI PATLSVIGTQ QLTFPSNAFD LIHCARCRVH WDADGGKPLL ELNRVLRPGG 300
  301 FFIWSATPVY RDNDRDSRIW NEMVSLTKSI CWKVVTKTVD SSGIGLVIYQ KPTSESCYNK 360
  361 RSTQDPPLCD KKEANGSWYV PLAKCLSKLP SGNVQSWPEL WPKRLVSVKP QSISVKAETL 420
  421 KKDTEKWSAS VSDVYLKHLA VNWSTVRNVM DMNAGFGGFA AALINLPLWV MNVVPVDKPD 480
  481 TLSVVYDRGL IGVYHDWCES VNTYPRTYDL LHSSFLLGDL TQRCEIVQVV AEIDRIVRPG 540
  541 GYLVVQDNME TIMKLESILG SLHWSTKIYE DRFLVGRKGF WRPAKPELR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle