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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PDI54_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSTSKIKSV DFYRKIPRDL TEASLSGAGL SIIAALSMIF LFGMELNNYL AVSTSTSVIV  60
   61 DRSADGDFLR LDFNISFPSL SCEFASVDVS DVLGTNRLNV TKTIRKFSID SNMRPTGSEF 120
  121 HAGEVLSLIN HGDETGEEIV EDSVPLTGRN FDTFTHQFPI LVVNFYAPWC YWCNLLKPSW 180
  181 EKAAKQIKER YDPEMDGRVI LAKVDCTQEG DLCRRNHIQG YPSIRIFRKG SDLKDDNAHH 240
  241 DHESYYGDRD TESLVKMVVS LVEPIHLEPH NLALEDKSDN SSRTLKKAPS TGGCRVEGYM 300
  301 RVKKVPGNLM VSARSGSHSF DSSQMNMSHV VNHLSFGRRI MPQKFSEFKR LSPYLGLSHD 360
  361 RLDGRSFINQ RDLGPNVTIE HYLQIVKTEV VKSNGQALVE AYEYTAHSSV AHSYYLPVAK 420
  421 FHFELSPMQV LITENSKSFS HFITNVCAII GGVFTVAGIL DSILHHSMTL MKKIELGKNF 480
  481 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle