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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GEX3_ARATH
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAFRFVYIP LPFFFFFFFF FVFFSGVSQL QDQTATKKSV RILSKILIGD DGRVYACSDN  60
   61 DFFSFESNGS IAWSVHMNFK CNTDFAPVYS GFNQMLLLAE NRILRVIFPR NGTKSEPELF 120
  121 FDPGETILGF AVSVSSSSVY ITVKNHGLYA YNMFRQQLWI AEPKIERFGY RLGCRKDFDN 180
  181 CTFNSRPVID SCEGSIYISN NEGELYSLSL RGTYYQWIQD FSLVDRFFTV TPGNNGLVYV 240
  241 VFPIKSLVFA LDSFSGDILW QKTIGPLAET SASDPVIDSN SWASIGSLDG TLYSFSRTGD 300
  301 LYKIPKNAET DSVIQIEPLL DCSGYAVYVS QTKFEGMIDR VIEDYTYVSA KKPETAVFSL 360
  361 VVPETRSIYW SQSYSDQIPG LLLDEDLQHF VLDERIALAF VAASSSGNPF RCRSKHEKLS 420
  421 SSCSFAEPEH LDIYIGNERA IIWFLLFEFV IMVLFAALVR FCFIFWKKKK LQDRPFSTFL 480
  481 DKRRLLHRKS REIDKTITRL QNESTANESA VDKIGDLIQK RENVKRKLSS TYSLGRDIDE 540
  541 SKSKLKDYVL PLYGGSSRSF SYRNRENESI TIFQTPSDES SSEESYRDEH YDDVADDEHD 600
  601 EDDLDRKQKG KLLAHSEGSS NDGDGIASSR RSIYLKHIFD D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle