YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ENT3_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	18	0.92
Transmembrane Helix	19	38	0.93
Non-Cytoplasmic	39	55	0.83
Transmembrane Helix	56	75	0.92
Cytoplasmic	76	85	0.89
Transmembrane Helix	86	105	0.96
Non-Cytoplasmic	106	111	0.83
Transmembrane Helix	112	132	0.91
Cytoplasmic	133	146	0.76
Transmembrane Helix	147	168	0.89
Non-Cytoplasmic	169	183	0.90
Transmembrane Helix	184	206	0.93
Cytoplasmic	207	263	0.94
Transmembrane Helix	264	284	0.90
Non-Cytoplasmic	285	291	0.89
Transmembrane Helix	292	311	0.88
Cytoplasmic	312	326	0.83
Transmembrane Helix	327	346	0.91
Non-Cytoplasmic	347	352	0.85
Transmembrane Helix	353	376	0.88
Cytoplasmic	377	387	0.86
Transmembrane Helix	388	411	0.89
Non-Cytoplasmic	412	418	0.90

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADRYENQPP EKLQGKYQAM VVCCILGIGS LVSWNSMLTI ADYYYKVFPD YHPSRVLTLV  60
   61 YQPFALGTIL ILAYHESKIN TRKRNLIGYI LFTISTFLLI VLDLATKGRG GIGPYIGLCA 120
  121 VVASFGLADA TVQGGMIGDL SLMCPELVQS FMGGLAVSGA LTSALRLITK AAFEKTNDGP 180
  181 RKGAMMFLAI STCIELLCVF LYAYVFPKLP IVKYYRRKAA SEGSKTVSAD LAAAGIQNQS 240
  241 DLTDDDSKNQ RLSNKELLIQ NIDYAVNLFL IYVCTLSIFP GFLYENTGQH GLGDWYALVL 300
  301 VAMYNCWDLV GRYTPLVKWL KIENRKLITI AVLSRYLLIP AFYFTAKYGD QGWMIMLISV 360
  361 LGLTNGHLTV CIMTIAPKGY KGPEQNALGN LLVIFLLGGI FAGVALDWLW LIGKKNAF