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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT4D_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLAASSSL LSCLLVLFLS SVSAVTDDKQ VYIVYMGSLS SRADYTPTSD HMNILQEVTG  60
   61 ESSIEGRLVR SYKRSFNGFA ARLTESERER VAKMVGVVSV FPNKKLQLQT TTSWDFMGLK 120
  121 EGIKTKRNPT VESDTIIGVI DSGITPESQS FSDKGFGPPP QKWKGVCSGG KNFTCNNKLI 180
  181 GARDYTSEGT RDMDGHGTHT ASTAAGNAVV DASFFGIGNG TVRGGVPASR VAAYKVCTPT 240
  241 GCSSEALLSA FDDAIADGVD LITISIGDKT ASMFQNDPIA IGAFHAMAKG VLTVNSAGNS 300
  301 GPKPISVSGV APWILTVAAS TTNRGFVTKV VLGNGKTLVG KSVNAYEMKG KDYPLVYGKS 360
  361 AASSACDAES AGLCELSCVD KSRVKGKILV CGGPGGLKIV ESVGAVGLIY RTPKPDVAFI 420
  421 HPLPAAGLLT EDFESLVSYL ESTDSPQAIV LKTEAIFNRT SPVIASFSSR GPNTIAVDIL 480
  481 KPDITAPGVE ILAAYSPAGE PSQDDTRHVK YSVLSGTSMS CPHVAGVAAY VKTFNPKWSP 540
  541 SMIQSAIMTT AWPVNATGTG IASTEFAYGS GHVDPIAASN PGLVYELDKS DHIAFLCGMN 600
  601 YTSQVLKVIS GETVTCSEAK KILPRNLNYP SMSAKLSGSG TTFTVTFNRT LTNVGTPNST 660
  661 YTSKVVAGHG SKLDVKITPS VLSFKTVNEK QSFTVTVTGS NLDSEVPSSA NLIWSDGTHN 720
  721 VRSPIVVYTS DY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle