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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25406184, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLHLLLLLC LSSSLKVQAS VHEYRSERFV SKGNAFVFHG GSEGIYSSSP SDNFTSDSDS  60
   61 VSFIRFEKIK FQRPEEVSNR SSLSIHAVVF EVEDRENIGG SAYGGQRAVC CTSDLAKLGV 120
  121 CSHGDVIYRP SAKDSGWPQV FGVSLAENEF SVILPTRSIQ VTRTGMYNLY FIHCDSDLKD 180
  181 LVVEGKTIWK NPTGYLPGRM APLMYFYGFM SLAFVLLGIF WFSQCARFWR EVLPLQNCLT 240
  241 LVITLGMCEM ALWYFDYAEF NETGIRPTVI TIWAVTFGSI KRTSARIIIL MVSMGYGVVR 300
  301 PTLGGFTSKV IMLGVTFFIA SEILELMENV GAVSDLSGKA RLFFVLPVAI LDAFFIIWIF 360
  361 KSLSATFKKL QTRRLLVKLD IYRKFTNALA VDILVSLGWI CYELYFKSKD VYNEHWQNAW 420
  421 IIPAFWQLLS FSLLIVICSL WAPSQNSTRY AFSGSSGDTS AEFEKDDYTL TLIKPSPIPS 480
  481 HEVKNLSETR LLPADEGEPE KDLEEDKRE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle